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Major Products List and User Manual of SmallSoft Co., Ltd
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WeGAS (Genome Annotation)
Genome Analysis annotation S/W 서브 시스템
- Gene Prediction : Gene Prediction System based on HMM
- Homology Search : Homology Search for Genome Project by using BLAST
- COG analysis : Gene Ontology analysis for prokaryotes
- GO analysis : Gene Ontology analysis for prokaryotes and eukaryotes
- COG/GO analysis
- Genome DataBase와 연계 기능
WeGAS Functional (Genome Annotation)
Genome DB 및 실무 프로젝트용 서브 시스템
- Genome Database : MySQL used as DB engine
- Promoter Search : Promoter search of predicted genes for Genome Project
- Motif Search :Motif search of predicted genes
- Gene Prediction-Stand Alone
GATool (Genome Assembly)
Genome DB 및 실무 프로젝트용 서브 시스템
- Base Caller : base callinf for ABI format data
- Base Viewer : chromatogram viewer and editing
- Contig assembly : Phrap 활용
- Contig viewer : Contig view as mode of block, sequence, chromatogram
- Scaffold analyzer/viewer : Scaffold analysis by using pairing information
of fosmid/cosmid,
BAC; visulaization, error detection, multi-sheet printing function for all Scaffold
- Genomics LIMS :LIMS for genomic sequences, contig, scaffold management and retrieve
WeGAS Viewers
Genome Analysis browsing S/W 서브 시스템
- Genome linear browser : Linear form browsing for COG and GO analysis results
- Genome circular browser : Circle form browsing for COG and GO analysis results
- Genome feature viewer : detail information of gene
- Genome DB와 연계 기능
G-LIMS
Genome Project 데이터 관리 시스템
- Project Administration
- Library Administration
- Plate Administration & Phred RUN
- Assembly Set & Phrap
ASMPKS
Genome 활용 미생물 소재 검색 서브 시스템
- Polyketide navigation
- Polyketide Genome
- Genome DB
CompG (Comparative Genome Analysis)
Comparative genome analysis S/W 서브 시스템
- Genome alignment
- Coding region comparison
- Promoter comparison
- Motif anlaysis
- Genome DB
ISAWB
유전 자원 검색 및 분석 시스템
- ISAWB Database Retrival System
- ISAWB Database Edit System
- Group manager for PHYLODraw
- PrimerMaker
- DotPlotView
- HydroView
- ISAWB-Seq
WinBioDBs
데이터베이스 통합 검색 시스템
- Project Processes
- Bio Database Process
- WinBioDBs Retrieval System
ESTAS (EST Analysis)
EST analysis S/W 서브 시스템
- EST DB browing
- EST assembly : clustering/assembly
- EST sorting : sorting according to the EST library
- EST homology analysis
- EST Genome browing : browsing for mapping information on genome
- EST contig viewer : viewing of construction information about contig
- EST Sorting viewer : Statistical reporting of library sorting
PeMFiS (Proteome Analysis)
- Peptide fragment analysis
- Homology search
- Analysis browsing
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